Sammy Lee slapped with misconduct charge
Lee was sent from the dug-out for yelling at fourth official Stuart Attwell when referee Phil Dowd refused to award Liverpool a penalty late in Sunday's Premier League game.
He has until Wednesday to respond to the charge under new fast-track regulations relating to technical area offences, aimed at getting a resolution within a month of the relevant incidents taking place.
The FA also charged two lower-division managers with improper conduct - Peterborough United's Darren Ferguson, the son of Manchester United's Alex, and Paul Lambert who took charge of League One Norwich City on Tuesday.
Ferguson was charged with using abusive language towards the referee after Tuesday's 3-2 home defeat by West Bromwich Albion in the Championship.
Lambert was charged after being dismissed from the dugout in his last match in charge of League One Colchester United against Yeovil Town on Saturday.